首页 期刊 中国药理学与毒理学 Whole transcriptome analysis identifies differentially regulated networks during proliferation inhibition and megakaryocytic differentiation of AML cell induced by DMAG 【正文】

Whole transcriptome analysis identifies differentially regulated networks during proliferation inhibition and megakaryocytic differentiation of AML cell induced by DMAG

作者:WANG; Long; LI; Xiao-xuan; LIU; Sha; YANG; Jing; WU; Jian-ming Southwest; Medical; University; Luzhou; 646000; China; The; Second; People′s; Hospital; of; Yibin; Yibin; 644000; China
dmag   acute   myeloid   leukemia   differentiation  

摘要:OBJECTIVE To elucidate the underlying mechanism of DMAG in proliferation inhibition and differentia⁃tion induction on acute myeloid leukemia(AML)cell line HEL.METHODS Through CCK8 assay and colony-formation assay to detect the anti-proliferative ability of DMAG on HEL cells.Cell morphological observation(including Giemsa staining assay)and flow cytometry detecting the expression of CD41/CD42b and DNA ploidy detection were performed to identify the effect of DMAG on differentiation of HEL cells.Whole-transcriptome sequencing was taken to investigate the potential molecular mechanism of anti-AML effect of DMAG.Gene Ontology(GO)and KEGG pathway analyses were performed to evaluate molecular processes and biological pathways associated with di ff erentially expressed lncRNA,mRNA,miRNA and circRNA induced by DMAG.Co-expression network analysis was implemented to characterize the differentially expressed lncRNAs,mRNAs,miRNAs and cicrRNAs induced by DMAG.RT-qPCR was used to verify the reliability of the whole-transcriptome sequencing data.RESULTS DMAG not only significantly inhibited the prolifera⁃tion of HEL cells,but also induced the differentiation of HEL cells to megakaryocytes.Whole-transcriptome sequencing showed that a total of 595 lncRNAs,64 miRNAs,4030 mRNAs and 35 circRNAs were remarkably differentially expressed during DMAG induced differentiation of HEL cells.GO and KEGG pathway analyses revealed that those dif⁃ferentially expressed non-coding RNAs were mainly involved in biological processes as diverse as metabolic pathway,apoptosis and cell cycle.Co-expression network analysis indicated that the lncRNA-miRNA-mRNA co-expression network consisted of 40 lncRNAs and 33 miRNAs and 81 mRNAs.Meanwhile,24 circRNA,22 miRNA and 65 mRNAs partook in the construction of circRNA-miRNA-mRNA co-expression network.CONCLUSION DMAG may act as a potent differenti⁃ation inducer of AML cells.

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